Plot heatmap of samples from an McMC analysis

Source: R/PlotParameterHeatmap.R

Returns a ggplot heatmap which represents the joint marginal density of a given pair of model parameters obtained by McMC using Discuit in R or Julia.

PlotParameterHeatmap(mcmcResults, parameterX = 1, parameterY = 2,
  targetParameters = NULL)

Arguments

mcmcResults

McmcResults object.
parameterX

index of model parameter to be plotted on x axis, starting at 0.
parameterY

index of model parameter to be plotted on y axis.
targetParameters

vector containing the target values of the model parameters, if known.

Examples

# NOT RUN {
PlotParameterHeatmap(mcmcResults)
PlotParameterHeatmap(mcmcResults, 1, 2, targetTheta)
# }